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agomez |
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#!/usr/bin/python
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agomez |
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#
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# BonFIRE Virtual Clusters on Federated Clouds Demonstration Kit
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#
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# Copyright (c) Fundacion Centro Tecnologico de Supercomputacion de Galicia 2012
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#
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# License GPL Version 3
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#
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# The research leading to these results has received funding from
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# the European Community's Seventh Frameqork Programme (FP7/2007-2013)
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# under agreement number 257386
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#
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# This software is provided with ABSOLUTELY NO WARRANTY
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#
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agomez |
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import os
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import os.path
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import subprocess
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import sys
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import time
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from logger import log,configure
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if len(sys.argv)>1:
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configure(logfile = sys.argv[1], debug=True, console=False)
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else:
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configure(debug=True, console=True)
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try:
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import bonfire
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import hostsfile
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import ogs
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import vcutil
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allow_single_cluster = True
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default_bonfire = "/etc/default/bonfire"
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bonfire.read_defaults(default_bonfire)
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hosts_file = "/etc/hosts"
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log.info("Bonfire URI: %s" % bonfire.uri)
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log.info("Credentials: %s:%s" % (bonfire.user,bonfire.password,))
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log.info("Experiment: %s" % bonfire.experiment_id)
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#Basic hostsfile for main nodes
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master_host = None
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shadow_host = None
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log.info("Get experiment")
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while (master_host == None) and ((not allow_single_cluster) or (shadow_host == None)) :
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experiment = bonfire.get_experiment(bonfire.experiment_id)
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for compute in experiment['computes']:
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if compute["hostname"].startswith("master"):
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master_host = (compute['ip'],compute['hostname'])
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elif compute["hostname"].startswith("shadow"):
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shadow_host = (compute['ip'],compute['hostname'])
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main_hosts = [('127.0.0.1','localhost'), master_host]
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if shadow_host:
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main_hosts.append(shadow_host)
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log.debug(main_hosts)
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hostsfile.store(hosts_file,main_hosts)
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#Initialize volume
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#log.info "Zeroing volume"
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#log.info vcutil.execute("dd if=/dev/zero of=/dev/xvde bs=1M ",ignore_error=True)
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#Destroy previous file system
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# log.info("Destroying file system")
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# log.info(vcutil.execute("dd if=/dev/zero of=/dev/xvde bs=1M count=10",ignore_error=True))
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if bonfire.hostname.startswith("master"):
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log.info("I am master node")
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backup_hostname = ""
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if shadow_host:
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backup_hostname = shadow_host[1]
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ogs_conf = """
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SGE_ROOT=\"/shared/ogs\"
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SGE_QMASTER_PORT=\"6444\"
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SGE_EXECD_PORT=\"6445\"
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SGE_ENABLE_SMF=\"false\"
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SGE_ENABLE_ST=\"false\"
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SGE_CLUSTER_NAME=\"virtual\"
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CELL_NAME=\"default\"
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ADMIN_USER=\"\"
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QMASTER_SPOOL_DIR=\"/shared/ogs/default/spool/qmaster\"
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EXECD_SPOOL_DIR=\"/shared/ogs/default/spool\"
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GID_RANGE=\"20000-20100\"
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SPOOLING_METHOD=\"classic\"
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DB_SPOOLING_SERVER=\"none\"
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PAR_EXECD_INST_COUNT=\"20\"
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ADMIN_HOST_LIST=\"%s\"
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SUBMIT_HOST_LIST=\"%s %s\"
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EXEC_HOST_LIST=\"\"
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EXECD_SPOOL_DIR_LOCAL=\"\"
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COPY_COMMAND=\"scp\"
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DEFAULT_DOMAIN=\"none\"
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ADMIN_MAIL=\"none\"
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ADD_TO_RC=\"false\"
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SET_FILE_PERMS=\"true\"
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RESCHEDULE_JOBS=\"wait\"
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SCHEDD_CONF=\"1\"
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SHADOW_HOST=\"%s\"
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REMOVE_RC=\"false\"
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HOSTNAME_RESOLVING=\"true\"
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""" % (master_host[1], master_host[1], backup_hostname, backup_hostname)
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if shadow_host:
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drbd_global = """global {
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usage-count no;
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}
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common {
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protocol C;
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meta-disk internal;
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syncer {
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rate 10M;
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}
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disk {
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on-io-error detach;
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}
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}"""
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drbd_res = """resource r0 {
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net {
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allow-two-primaries;
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after-sb-0pri disconnect;
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after-sb-1pri disconnect;
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after-sb-2pri disconnect;
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}
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on %s {
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device /dev/drbd1;
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disk /dev/xvde;
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address %s:7789;
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meta-disk internal;
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}
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on %s {
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device /dev/drbd1;
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disk /dev/xvde;
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address %s:7789;
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meta-disk internal;
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}
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}""" % (master_host[1],master_host[0],shadow_host[1],shadow_host[0])
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ocfs_conf = """cluster:
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node_count = 2
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name = ocfs2
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node:
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ip_port = 7777
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ip_address = %s
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number = 0
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name = %s
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cluster = ocfs2
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node:
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ip_port = 7777
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ip_address = %s
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number = 1
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name = %s
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cluster = ocfs2""" % (master_host[0],master_host[1],shadow_host[0],shadow_host[1])
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#Install DRBD
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log.info("Master - Configure DRBD")
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with open("/etc/drbd.d/global_common.conf",'w') as file:
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file.write(drbd_global)
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with open("/etc/drbd.d/r0.res",'w') as file:
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file.write(drbd_res)
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log.debug(vcutil.execute("modprobe drbd"))
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log.info("Master - Prepare SSH access to shadow")
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import paramiko
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ssh = paramiko.SSHClient()
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ssh.load_system_host_keys()
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ssh.set_missing_host_key_policy(paramiko.AutoAddPolicy())
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sftp = None
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while True:
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try:
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# ssh.connect(shadow_host[1],key_filename="/root/.ssh/id_rsa")
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ssh.connect(shadow_host[1],username="root",password="bonfire",timeout=10)
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sftp = ssh.open_sftp()
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log.info("Connected to: %s" % str(ssh.exec_command("hostname")[1].read()))
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break
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except Exception as err:
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log.info("Shadow not available: ")
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log.exception(err)
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time.sleep(10)
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log.info("Shadow - Configure DRBD")
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#log.info("Fill with %i blocks of 1M" % dev_size)
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#log.info(ssh.exec_command("dd if=/dev/zero of=/dev/xvde bs=1M count=%i" % dev_size)[1].read())
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#log.info(ssh.exec_command("dd if=/dev/zero of=/dev/xvde bs=1M" )[1].read())
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#log.info("Destroying file system")
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#log.info(ssh.exec_command("dd if=/dev/zero of=/dev/xvde bs=1M count=10")[1].read())
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file = sftp.open("/etc/drbd.d/global_common.conf",'w')
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file.write(drbd_global)
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file.close()
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file = sftp.open("/etc/drbd.d/r0.res",'w')
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file.write(drbd_res)
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file.close()
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log.debug(ssh.exec_command("modprobe drbd")[1].read())
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log.debug(ssh.exec_command("/etc/init.d/drbd restart")[1].read())
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log.debug(ssh.exec_command("drbdadm -- --force create-md r0")[1].read())
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log.debug(vcutil.execute("drbd-overview"))
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log.debug(ssh.exec_command("drbdadm up r0")[1].read())
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output = vcutil.execute("drbd-overview")
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log.debug(output)
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log.info("Master - Connecting DRBD")
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while not "Connected" in output[0]:
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time.sleep(2)
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log.debug(vcutil.execute("drbdadm down r0"))
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log.debug(vcutil.execute("drbdadm -- --force wipe-md r0"))
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log.debug(vcutil.execute("/etc/init.d/drbd restart"))
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log.debug(vcutil.execute("drbdadm -- --force create-md r0"))
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log.debug(vcutil.execute("drbdadm up r0"))
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output = vcutil.execute("drbd-overview")
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log.debug(output)
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while "WFConnection" in output[0]:
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time.sleep(2)
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output = vcutil.execute("drbd-overview")
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log.debug(output)
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log.info("Master - Syncing volumes...")
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log.debug(vcutil.execute("drbd-overview"))
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log.debug(vcutil.execute("drbdadm -- --clear-bitmap new-current-uuid r0"))
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log.debug(vcutil.execute("drbd-overview"))
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log.debug(vcutil.execute("drbdadm primary r0"))
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log.debug(vcutil.execute("drbd-overview"))
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#log.debug(vcutil.execute("drbdadm -- --overwrite-data-of-peer primary all"))
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#output = vcutil.execute("drbd-overview")
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#log.debug(output)
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#while not "UpToDate/UpToDate" in output[0]:
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# time.sleep(10)
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# output = vcutil.execute("drbd-overview")
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# log.debug(output)
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log.info("Shadow - Setting both as primary...")
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log.debug(ssh.exec_command("drbdadm primary all")[1].read())
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#Install OCFS & NFS
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log.info("Master - Configuring OCFS")
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with open("/etc/ocfs2/cluster.conf",'w') as file:
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file.write(ocfs_conf)
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log.debug(vcutil.execute("""/etc/init.d/ocfs2 restart
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/etc/init.d/o2cb restart
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yes | mkfs -t ocfs2 -N 2 -F -L ocfs2_drbd1 /dev/drbd1
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mkdir -p /volume
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mount /dev/drbd1 /volume"""))
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else:
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log.info("Master - Formatting volume")
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log.debug(vcutil.execute("""mkfs -t ext3 /dev/xvde
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mkdir -p /volume
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mount /dev/xvde /volume
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mkdir /shared
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mount --bind /volume /shared"""))
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log.info("Master - Configuring NFS")
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log.debug(vcutil.execute("""echo '/volume 172.18.0.0/16(rw,sync,no_root_squash,no_subtree_check)' >> /etc/exports
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/etc/init.d/nfs-kernel-server restart"""))
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if shadow_host:
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log.info("Master - Re-mounting volumes...")
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log.debug(vcutil.execute("""mkdir -p /shared
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mount -t nfs -o nordirplus,hard,nointr,rw %s:/volume /shared""" % master_host[1]))
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| 260 : |
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log.info("Shadow - Configuring OCFS")
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file = sftp.open("/etc/ocfs2/cluster.conf",'w')
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| 263 : |
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file.write(ocfs_conf)
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file.close()
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| 265 : |
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log.debug(ssh.exec_command("""/etc/init.d/ocfs2 restart
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| 266 : |
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/etc/init.d/o2cb restart
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| 267 : |
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mkdir -p /volume
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| 268 : |
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mount /dev/drbd1 /volume""")[1].read())
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| 269 : |
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log.info("Shadow - Configuring NFS")
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| 271 : |
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log.debug(ssh.exec_command("""echo '/volume 172.18.0.0/16(rw,sync,no_root_squash,no_subtree_check)' >> /etc/exports
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| 272 : |
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/etc/init.d/nfs-kernel-server restart""")[1].read())
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| 273 : |
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| 274 : |
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log.info("Shadow - Re-mounting volumes...")
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| 275 : |
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log.debug(ssh.exec_command("""mkdir -p /shared
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| 276 : |
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mount -t nfs -o nordirplus,hard,nointr,rw %s:/volume /shared
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| 277 : |
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df -h""" % shadow_host[1])[1].read())
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| 278 : |
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| 279 : |
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#Install OGS & VC scripts
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| 280 : |
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log.info("Master - Installing OGS...")
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| 281 : |
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log.debug(vcutil.execute("""mkdir -p /shared/ogs
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| 282 : |
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mkdir -p /shared/home
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| 283 : |
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df -h"""))
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| 284 : |
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with open("/shared/ogs/ogs.conf",'w') as file:
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| 285 : |
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file.write(ogs_conf)
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| 286 : |
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log.debug(vcutil.execute("""export SGE_ROOT=/shared/ogs
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| 287 : |
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tar xzf /root/sge_root.tar.gz -C $SGE_ROOT/..
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| 288 : |
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chown -R root:root $SGE_ROOT
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| 289 : |
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cd $SGE_ROOT
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| 290 : |
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./inst_sge -m -auto $SGE_ROOT/ogs.conf
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| 291 : |
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echo \"source $SGE_ROOT/default/common/settings.sh\" >> /root/.bashrc
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| 292 : |
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echo \"export SGE_CHECK_INTERVAL=45\" >> /root/.bashrc
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| 293 : |
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echo \"export SGE_GET_ACTIVE_INTERVAL=90\" >> /root/.bashrc
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| 294 : |
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echo \"export SGE_DELAY_TIME=120\" >> /root/.bashrc
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| 295 : |
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cp $SGE_ROOT/default/common/sgemaster /etc/init.d"""))
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| 296 : |
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| 297 : |
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log.info("Master - Initializing Virtual Cluster script...")
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| 298 : |
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# vcutil.execute(". /shared/ogs/default/common/settings.sh; python -u /root/vc/vc-main-host-updater.py &> /var/log/vc-main-host-updater.log", fork = True)
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| 299 : |
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vcutil.execute(". /root/.bashrc; python -u /root/vc/vc-main-host-updater.py /var/log/vc-main-host-updater.log", fork = True)
|
| 300 : |
|
|
|
| 301 : |
|
|
if shadow_host:
|
| 302 : |
|
|
log.info("Shadow - Installing OGS...")
|
| 303 : |
|
|
log.debug(ssh.exec_command("""export SGE_ROOT=/shared/ogs
|
| 304 : |
|
|
cd $SGE_ROOT
|
| 305 : |
|
|
./inst_sge -sm -auto $SGE_ROOT/ogs.conf
|
| 306 : |
|
|
echo \". $SGE_ROOT/default/common/settings.sh\" >> /root/.bashrc
|
| 307 : |
|
|
echo \"export SGE_CHECK_INTERVAL=45\" >> /root/.bashrc
|
| 308 : |
|
|
echo \"export SGE_GET_ACTIVE_INTERVAL=90\" >> /root/.bashrc
|
| 309 : |
|
|
echo \"export SGE_DELAY_TIME=120\" >> /root/.bashrc
|
| 310 : |
|
|
cp $SGE_ROOT/default/common/sgemaster /etc/init.d""")[1].read())
|
| 311 : |
|
|
|
| 312 : |
|
|
log.info("Shadow - Initializing Virtual Cluster script...")
|
| 313 : |
|
|
log.debug(ssh.exec_command("nohup < /dev/null python -u /root/vc/vc-main-host-updater.py /var/log/vc-main-host-updater.log &")[1].read())
|
| 314 : |
|
|
else:
|
| 315 : |
|
|
log.info("I am shadow node, additional startup actions for me will be performed by master node")
|
| 316 : |
|
|
except Exception as excpt:
|
| 317 : |
|
|
log.exception(excpt)
|
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