Revision 10 -
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(annotate)
Wed Jun 10 13:01:42 2015 UTC
(9 years, 3 months ago)
by ulcessvp File size: 7608 byte(s)
Subido el nuevo caso de uso proporcionado por Santiago
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; Printer file for South hake model
; Compare with catch length distribution
; Standart output
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;;; SUMMARY PRINTER
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;;LIKELIHOOD SUMMARY; Summary of likelihood component that gives component name, weight and score for area and timestep
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[component]
type likelihoodsummaryprinter
printfile ../out/hke.lik.summ.out
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;;; LIKELIHOOD PRINTER
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;; FLEETS
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[component]
type likelihoodprinter
likelihood Land1.ldist
printfile ../out/expected.landings1.ld
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood Land.ldist
printfile ../out/expected.landings.ld
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood cdLand.ldist
printfile ../out/expected.cdlandings.ld
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood Disc.ldist
printfile ../out/expected.discards.ld
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood SpDem.ldist
printfile ../out/expected-sp_surv.ld
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood PtDem.ldist
printfile ../out/expected-pt_surv.ld
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood CdAut.ldist
printfile ../out/expected-cdAut_surv.ld
;yearsandsteps all all
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;; INDEX
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[component]
type likelihoodprinter
likelihood SpIndex15cm.1
printfile ../out/SpINDEX15.1.print
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood SpIndex15cm.2
printfile ../out/SpINDEX15.2.print
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood SpIndex15cm.3
printfile ../out/SpINDEX15.3.print
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood SpIndex15cm.4
printfile ../out/SpINDEX15.4.print
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood PtIndex15cm.1
printfile ../out/PtINDEX15.1.print
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood PtIndex15cm.2
printfile ../out/PtINDEX15.2.print
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood PtIndex15cm.3
printfile ../out/PtINDEX15.3.print
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood PtIndex15cm.4
printfile ../out/PtINDEX15.4.print
;yearsandsteps all all
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;; CPUE
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[component]
type likelihoodprinter
likelihood SpCPUE15cm.1
printfile ../out/SpCPUE15.1.print
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood SpCPUE15cm.2
printfile ../out/SpCPUE15.2.print
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood SpCPUE15cm.3
printfile ../out/SpCPUE15.3.print
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood PtCPUE15cm.1
printfile ../out/PtCPUE15.1.print
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood PtCPUE15cm.2
printfile ../out/PtCPUE15.2.print
;yearsandsteps all all
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[component]
type likelihoodprinter
likelihood PtCPUE15cm.3
printfile ../out/PtCPUE15.3.print
;yearsandsteps all all
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;;; STOCK PRINTER
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;; TOTAL BIOMASS BY AGE AND QUARTER (N MATRIX) - EJ
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[component]
type stockprinter
stocknames hke
areaaggfile ../agg/area.agg
ageaggfile ../agg/hke.age.agg
lenaggfile ../agg/hke.alllen.agg
printfile ../out/hkeAgeN.out
printatstart 1 ;at the start of the timestep. O default at the end
yearsandsteps all all
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;; TOTAL BIOMASS BY LENGTH AND QUARTER (N MATRIX)- EJ
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[component]
type stockprinter
stocknames hke
areaaggfile ../agg/area.agg
ageaggfile ../agg/hke.allage.agg
lenaggfile ../agg/hke.len1.agg
printfile ../out/hkeLenN.out
printatstart 1 ;at the start of the timestep. O default at the end
yearsandsteps all all
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;; DATA FOR LEN DISTRIBUTION PLOT - TOTAL BIOMASS BY 2CM_LENGTH AND QUARTER (N MATRIX) - EJ
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[component]
type stockprinter
stocknames hke
areaaggfile ../agg/area.agg
ageaggfile ../agg/hke.allage.agg
lenaggfile ../agg/hke.len2.agg ; numbers and mean weight at LEN2CM (from 4 to 130 cm)
printfile ../out/NWLen2cm.report
printatstart 1 ;at the start of the timestep. O default at the end
yearsandsteps all all
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;;; STOCK STANDARD PRINTER
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;; TOTAL STANDARD BIOMASS
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[component]
type stockstdprinter
stockname hke
scale 1 ;no scale
printfile ../out/hke.std.out
printatstart 1 ;at the start of the timestep. O default at the end
yearsandsteps all all
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;;; PREDATOR PREY PRINTER
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; TOTAL CATCH BY AGE AND QUARTER (C MATRIX) - EJ
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[component]
type predatorpreyprinter
predatornames land1 land2 landCd disc
preynames hke
areaaggfile ../agg/area.agg
ageaggfile ../agg/hke.age.agg
lenaggfile ../agg/hke.alllen.agg
printfile ../out/hkeAgeC.out
yearsandsteps all all
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;; LANDINGS BY AGE AND QUARTER (L MATRIX) - EJ
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[component]
type predatorpreyprinter
predatornames land1 land2 landCd
preynames hke
areaaggfile ../agg/area.agg
ageaggfile ../agg/hke.age.agg
lenaggfile ../agg/hke.alllen.agg
printfile ../out/hkeAgeL.out
yearsandsteps all all
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;; DISCARDS BY AGE AND QUARTER (D MATRIX) - EJ
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[component]
type predatorpreyprinter
predatornames disc
preynames hke
areaaggfile ../agg/area.agg
ageaggfile ../agg/hke.age.agg
lenaggfile ../agg/hke.alllen.agg
printfile ../out/hkeAgeD.out
yearsandsteps all all
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;; TOTAL CATCH BY LENGTH AND QUARTER (C MATRIX) - EJ
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[component]
type predatorpreyprinter
predatornames land1 land2 landCd disc
preynames hke
areaaggfile ../agg/area.agg
ageaggfile ../agg/hke.allage.agg
lenaggfile ../agg/hke.len1.agg
printfile ../out/hkeLenC.out
yearsandsteps all all
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;; LANDINGS BY LENGTH AND QUARTER (L MATRIX) - EJ
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[component]
type predatorpreyprinter
predatornames land1 land2 landCd
preynames hke
areaaggfile ../agg/area.agg
ageaggfile ../agg/hke.allage.agg
lenaggfile ../agg/hke.len1.agg
printfile ../out/hkeLenL.out
yearsandsteps all all
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;; DISCARDS BY LENGTH AND QUARTER (D MATRIX) - EJ
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[component]
type predatorpreyprinter
predatornames disc
preynames hke
areaaggfile ../agg/area.agg
ageaggfile ../agg/hke.allage.agg
lenaggfile ../agg/hke.len1.agg
printfile ../out/hkeLenD.out
yearsandsteps all all
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;; DATA FOR LEN DISTRIBUTION PLOT - TOTAL CATCH BY 2CM_LENGTH AND QUARTER (C MATRIX) - EJ
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[component]
type predatorpreyprinter
predatornames land1 land2 landCd disc
preynames hke
areaaggfile ../agg/area.agg
ageaggfile ../agg/hke.allage.agg
lenaggfile ../agg/hke.len2.agg ; numbers and mean weight at LEN2CM (from 4 to 130 cm)
printfile ../out/FCatLen2cm.report
yearsandsteps all all
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;; DATA FOR LEN DISTRIBUTION PLOT - DISCARDS BY 2CM_LENGTH AND QUARTER (C MATRIX) - EJ
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[component]
type predatorpreyprinter
predatornames disc
preynames hke
areaaggfile ../agg/area.agg
ageaggfile ../agg/hke.allage.agg
lenaggfile ../agg/hke.len2.agg ; numbers and mean weight at LEN2CM (from 4 to 130 cm)
printfile ../out/FDisLen2cm.report
yearsandsteps all all