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agomez |
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#ifndef readaggregation_h
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#define readaggregation_h
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#include "commentstream.h" |
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#include "intmatrix.h" |
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#include "doublematrix.h" |
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#include "charptrmatrix.h" |
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#include "formulamatrix.h" |
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/**
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* \brief This is the function that will read aggregation data from a file into a matrix
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* \param infile is the CommentStream to read the aggregation data from
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* \param agg is the IntMatrix that the aggregated data will be stored in
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* \param aggindex is the CharPtrVector that the aggregated data labels will be stored in
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* \return number of aggregation entries read
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*/
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int readAggregation(CommentStream& infile, IntMatrix& agg, CharPtrVector& aggindex);
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/**
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* \brief This is the function that will read aggregation data from a file into a vector
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* \param infile is the CommentStream to read the aggregation data from
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* \param agg is the IntVector that the aggregated data will be stored in
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* \param aggindex is the CharPtrVector that the aggregated data labels will be stored in
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* \return number of aggregation entries read
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*/
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int readAggregation(CommentStream& infile, IntVector& agg, CharPtrVector& aggindex);
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/**
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* \brief This is the function that will read length aggregation data from a file
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* \param infile is the CommentStream to read the aggregation data from
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* \param lengths is the DoubleVector that the aggregated length data will be stored in
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* \param lenindex is the CharPtrVector that the aggregated length labels will be stored in
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* \return number of length aggregation entries read
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*/
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int readLengthAggregation(CommentStream& infile, DoubleVector& lengths, CharPtrVector& lenindex);
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/**
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* \brief This is the function that will read prey aggregation data from a file
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* \param infile is the CommentStream to read the aggregation data from
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* \param preynames is the CharPtrVector that the prey names will be stored in
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* \param preylengths is the DoubleMatrix that the aggregated prey length data will be stored in
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* \param digestioncoeff is the FormulaMatrix that the prey digestion data will be stored in
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* \param preyindex is the CharPtrVector that the aggregated prey labels will be stored in
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* \param keeper is the Keeper for the current model
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* \return number of prey aggregation entries read
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*/
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int readPreyAggregation(CommentStream& infile, CharPtrMatrix& preynames, DoubleMatrix& preylengths,
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FormulaMatrix& digestioncoeff, CharPtrVector& preyindex, Keeper* const keeper);
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#endif
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