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[mareframe] Diff of /trunk/gadget/growthcalc.h
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Diff of /trunk/gadget/growthcalc.h

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revision 2, Wed Apr 29 12:55:30 2015 UTC revision 12, Fri Jul 24 18:36:24 2015 UTC
# Line 30  Line 30 
30    /**    /**
31     * \brief This is the function that calculates the growth     * \brief This is the function that calculates the growth
32     * \param area is the area that the growth is being calculated on     * \param area is the area that the growth is being calculated on
33     * \param Lgrowth is the DoubleVector of the mean length increase for each length group of the stock     * \param Lgrowth is the Matrix of doubles of the mean length increase for each length group of the stock
34     * \param Wgrowth is the DoubleVector of the mean weight increase for each length group of the stock     * \param Wgrowth is the Matrix of doubles of the mean weight increase for each length group of the stock
35     * \param numGrow is the PopInfoVector of the current population of the stock     * \param numGrow is the PopInfoVector of the current population of the stock
36     * \param Area is the AreaClass for the current model     * \param Area is the AreaClass for the current model
37     * \param TimeInfo is the TimeClass for the current model     * \param TimeInfo is the TimeClass for the current model
38     * \param Fphi is the DoubleVector of the feeding level of the stock     * \param Fphi is the DoubleVector of the feeding level of the stock
39     * \param MaxCon is the DoubleVector of the maximum consumption of the stock     * \param MaxCon is the DoubleVector of the maximum consumption of the stock
40     * \param LgrpDiv is the LengthGroupDivision of the stock     * \param LgrpDiv is the LengthGroupDivision of the stock
41       * \param size is the number of columns of the Matrix
42     * \note This will be overridden by the derived classes that actually calculate the growth     * \note This will be overridden by the derived classes that actually calculate the growth
43     */     */
   virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,  
     const PopInfoVector& numGrow, const AreaClass* const Area,  
     const TimeClass* const TimeInfo, const DoubleVector& Fphi,  
     const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv) = 0;  
   
44    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,
45        const PopInfoVector& numGrow, const AreaClass* const Area,        const PopInfoVector& numGrow, const AreaClass* const Area,
46        const TimeClass* const TimeInfo, const DoubleVector& Fphi,        const TimeClass* const TimeInfo, const DoubleVector& Fphi,
# Line 92  Line 88 
88     * \param MaxCon is the DoubleVector of the maximum consumption of the stock     * \param MaxCon is the DoubleVector of the maximum consumption of the stock
89     * \param LgrpDiv is the LengthGroupDivision of the stock     * \param LgrpDiv is the LengthGroupDivision of the stock
90     */     */
91    virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,  //  virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,
92      const PopInfoVector& numGrow, const AreaClass* const Area,  //    const PopInfoVector& numGrow, const AreaClass* const Area,
93      const TimeClass* const TimeInfo, const DoubleVector& Fphi,  //    const TimeClass* const TimeInfo, const DoubleVector& Fphi,
94      const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);  //    const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);
95    
96    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,
97            const PopInfoVector& numGrow, const AreaClass* const Area,            const PopInfoVector& numGrow, const AreaClass* const Area,
98            const TimeClass* const TimeInfo, const DoubleVector& Fphi,            const TimeClass* const TimeInfo, const DoubleVector& Fphi,
99            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size) {};            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size);
100  protected:  protected:
101    /**    /**
102     * \brief This is the number of growth parameters (set to 9)     * \brief This is the number of growth parameters (set to 9)
# Line 145  Line 141 
141     * \param MaxCon is the DoubleVector of the maximum consumption of the stock     * \param MaxCon is the DoubleVector of the maximum consumption of the stock
142     * \param LgrpDiv is the LengthGroupDivision of the stock     * \param LgrpDiv is the LengthGroupDivision of the stock
143     */     */
144    virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,  //  virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,
145      const PopInfoVector& numGrow, const AreaClass* const Area,  //    const PopInfoVector& numGrow, const AreaClass* const Area,
146      const TimeClass* const TimeInfo, const DoubleVector& Fphi,  //    const TimeClass* const TimeInfo, const DoubleVector& Fphi,
147      const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);  //    const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);
148    
149    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,
150            const PopInfoVector& numGrow, const AreaClass* const Area,            const PopInfoVector& numGrow, const AreaClass* const Area,
151            const TimeClass* const TimeInfo, const DoubleVector& Fphi,            const TimeClass* const TimeInfo, const DoubleVector& Fphi,
152            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size) {};            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size);
153  protected:  protected:
154    /**    /**
155     * \brief This is the FormulaMatrixPtrVector of increase in length for each length group     * \brief This is the FormulaMatrixPtrVector of increase in length for each length group
# Line 198  Line 194 
194     * \param MaxCon is the DoubleVector of the maximum consumption of the stock     * \param MaxCon is the DoubleVector of the maximum consumption of the stock
195     * \param LgrpDiv is the LengthGroupDivision of the stock     * \param LgrpDiv is the LengthGroupDivision of the stock
196     */     */
197    virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,  //  virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,
198      const PopInfoVector& numGrow, const AreaClass* const Area,  //    const PopInfoVector& numGrow, const AreaClass* const Area,
199      const TimeClass* const TimeInfo, const DoubleVector& Fphi,  //    const TimeClass* const TimeInfo, const DoubleVector& Fphi,
200      const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);  //    const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);
201    
202    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,
203            const PopInfoVector& numGrow, const AreaClass* const Area,            const PopInfoVector& numGrow, const AreaClass* const Area,
204            const TimeClass* const TimeInfo, const DoubleVector& Fphi,            const TimeClass* const TimeInfo, const DoubleVector& Fphi,
205            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size) {};            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size);
206    /**    /**
207     * \brief This will return the power term of the length - weight relationship     * \brief This will return the power term of the length - weight relationship
208     * \return lgrowthPar[7]     * \return lgrowthPar[7]
# Line 273  Line 269 
269     * \param MaxCon is the DoubleVector of the maximum consumption of the stock     * \param MaxCon is the DoubleVector of the maximum consumption of the stock
270     * \param LgrpDiv is the LengthGroupDivision of the stock     * \param LgrpDiv is the LengthGroupDivision of the stock
271     */     */
272    virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,  //  virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,
273      const PopInfoVector& numGrow, const AreaClass* const Area,  //    const PopInfoVector& numGrow, const AreaClass* const Area,
274      const TimeClass* const TimeInfo, const DoubleVector& Fphi,  //    const TimeClass* const TimeInfo, const DoubleVector& Fphi,
275      const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);  //    const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);
276    
277    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,
278            const PopInfoVector& numGrow, const AreaClass* const Area,            const PopInfoVector& numGrow, const AreaClass* const Area,
279            const TimeClass* const TimeInfo, const DoubleVector& Fphi,            const TimeClass* const TimeInfo, const DoubleVector& Fphi,
280            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size) {};            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size);
281    /**    /**
282     * \brief This will return the power term of the length - weight relationship     * \brief This will return the power term of the length - weight relationship
283     * \return lgrowthPar[7]     * \return lgrowthPar[7]
# Line 348  Line 344 
344     * \param MaxCon is the DoubleVector of the maximum consumption of the stock     * \param MaxCon is the DoubleVector of the maximum consumption of the stock
345     * \param LgrpDiv is the LengthGroupDivision of the stock     * \param LgrpDiv is the LengthGroupDivision of the stock
346     */     */
347    virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,  //  virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,
348      const PopInfoVector& numGrow, const AreaClass* const Area,  //    const PopInfoVector& numGrow, const AreaClass* const Area,
349      const TimeClass* const TimeInfo, const DoubleVector& Fphi,  //    const TimeClass* const TimeInfo, const DoubleVector& Fphi,
350      const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);  //    const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);
351    
352    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,
353            const PopInfoVector& numGrow, const AreaClass* const Area,            const PopInfoVector& numGrow, const AreaClass* const Area,
354            const TimeClass* const TimeInfo, const DoubleVector& Fphi,            const TimeClass* const TimeInfo, const DoubleVector& Fphi,
355            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size) {};            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size);
356    /**    /**
357     * \brief This will return the power term of the length - weight relationship     * \brief This will return the power term of the length - weight relationship
358     * \return lgrowthPar[7]     * \return lgrowthPar[7]
# Line 435  Line 431 
431     * \param MaxCon is the DoubleVector of the maximum consumption of the stock     * \param MaxCon is the DoubleVector of the maximum consumption of the stock
432     * \param LgrpDiv is the LengthGroupDivision of the stock     * \param LgrpDiv is the LengthGroupDivision of the stock
433     */     */
434    virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,  //  virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,
435      const PopInfoVector& numGrow, const AreaClass* const Area,  //    const PopInfoVector& numGrow, const AreaClass* const Area,
436      const TimeClass* const TimeInfo, const DoubleVector& Fphi,  //    const TimeClass* const TimeInfo, const DoubleVector& Fphi,
437      const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);  //    const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);
438    
439    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,
440            const PopInfoVector& numGrow, const AreaClass* const Area,            const PopInfoVector& numGrow, const AreaClass* const Area,
441            const TimeClass* const TimeInfo, const DoubleVector& Fphi,            const TimeClass* const TimeInfo, const DoubleVector& Fphi,
442            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size) {};            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size);
443  protected:  protected:
444    /**    /**
445     * \brief This is the number of growth parameters (set to 2)     * \brief This is the number of growth parameters (set to 2)
# Line 492  Line 488 
488     * \param MaxCon is the DoubleVector of the maximum consumption of the stock     * \param MaxCon is the DoubleVector of the maximum consumption of the stock
489     * \param LgrpDiv is the LengthGroupDivision of the stock     * \param LgrpDiv is the LengthGroupDivision of the stock
490     */     */
491    virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,  //  virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,
492      const PopInfoVector& numGrow, const AreaClass* const Area,  //    const PopInfoVector& numGrow, const AreaClass* const Area,
493      const TimeClass* const TimeInfo, const DoubleVector& Fphi,  //    const TimeClass* const TimeInfo, const DoubleVector& Fphi,
494      const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);  //    const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);
495    
496    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,
497            const PopInfoVector& numGrow, const AreaClass* const Area,            const PopInfoVector& numGrow, const AreaClass* const Area,
498            const TimeClass* const TimeInfo, const DoubleVector& Fphi,            const TimeClass* const TimeInfo, const DoubleVector& Fphi,
499            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size) {};            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size);
500  protected:  protected:
501    /**    /**
502     * \brief This is the number of growth parameters (set to 2)     * \brief This is the number of growth parameters (set to 2)
# Line 547  Line 543 
543     * \param MaxCon is the DoubleVector of the maximum consumption of the stock     * \param MaxCon is the DoubleVector of the maximum consumption of the stock
544     * \param LgrpDiv is the LengthGroupDivision of the stock     * \param LgrpDiv is the LengthGroupDivision of the stock
545     */     */
546    virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,  //  virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,
547      const PopInfoVector& numGrow, const AreaClass* const Area,  //    const PopInfoVector& numGrow, const AreaClass* const Area,
548      const TimeClass* const TimeInfo, const DoubleVector& Fphi,  //    const TimeClass* const TimeInfo, const DoubleVector& Fphi,
549      const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);  //    const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);
550    
551    
552    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,
# Line 610  Line 606 
606     * \param MaxCon is the DoubleVector of the maximum consumption of the stock     * \param MaxCon is the DoubleVector of the maximum consumption of the stock
607     * \param LgrpDiv is the LengthGroupDivision of the stock     * \param LgrpDiv is the LengthGroupDivision of the stock
608     */     */
609    virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,  //  virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,
610      const PopInfoVector& numGrow, const AreaClass* const Area,  //    const PopInfoVector& numGrow, const AreaClass* const Area,
611      const TimeClass* const TimeInfo, const DoubleVector& Fphi,  //    const TimeClass* const TimeInfo, const DoubleVector& Fphi,
612      const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);  //    const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);
613    
614    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,
615          const PopInfoVector& numGrow, const AreaClass* const Area,          const PopInfoVector& numGrow, const AreaClass* const Area,
616          const TimeClass* const TimeInfo, const DoubleVector& Fphi,          const TimeClass* const TimeInfo, const DoubleVector& Fphi,
617          const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size) {};          const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size);
618    /**    /**
619     * \brief This will return the power term of the length - weight relationship     * \brief This will return the power term of the length - weight relationship
620     * \return growthPar[4]     * \return growthPar[4]
# Line 671  Line 667 
667     * \param MaxCon is the DoubleVector of the maximum consumption of the stock     * \param MaxCon is the DoubleVector of the maximum consumption of the stock
668     * \param LgrpDiv is the LengthGroupDivision of the stock     * \param LgrpDiv is the LengthGroupDivision of the stock
669     */     */
670    virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,  //  virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,
671      const PopInfoVector& numGrow, const AreaClass* const Area,  //    const PopInfoVector& numGrow, const AreaClass* const Area,
672      const TimeClass* const TimeInfo, const DoubleVector& Fphi,  //    const TimeClass* const TimeInfo, const DoubleVector& Fphi,
673      const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);  //    const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);
674    
675    
676    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,
677            const PopInfoVector& numGrow, const AreaClass* const Area,            const PopInfoVector& numGrow, const AreaClass* const Area,
678            const TimeClass* const TimeInfo, const DoubleVector& Fphi,            const TimeClass* const TimeInfo, const DoubleVector& Fphi,
679            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size) {};            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size);
680    /**    /**
681     * \brief This will return the power term of the length - weight relationship     * \brief This will return the power term of the length - weight relationship
682     * \return growthPar[4]     * \return growthPar[4]
# Line 733  Line 729 
729     * \param MaxCon is the DoubleVector of the maximum consumption of the stock     * \param MaxCon is the DoubleVector of the maximum consumption of the stock
730     * \param LgrpDiv is the LengthGroupDivision of the stock     * \param LgrpDiv is the LengthGroupDivision of the stock
731     */     */
732    virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,  //  virtual void calcGrowth(int area, DoubleVector& Lgrowth, DoubleVector& Wgrowth,
733      const PopInfoVector& numGrow, const AreaClass* const Area,  //    const PopInfoVector& numGrow, const AreaClass* const Area,
734      const TimeClass* const TimeInfo, const DoubleVector& Fphi,  //    const TimeClass* const TimeInfo, const DoubleVector& Fphi,
735      const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);  //    const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv);
736    
737    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,    virtual void calcGrowth(int area, double* Lgrowth, double* Wgrowth,
738            const PopInfoVector& numGrow, const AreaClass* const Area,            const PopInfoVector& numGrow, const AreaClass* const Area,
739            const TimeClass* const TimeInfo, const DoubleVector& Fphi,            const TimeClass* const TimeInfo, const DoubleVector& Fphi,
740            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size) {};            const DoubleVector& MaxCon, const LengthGroupDivision* const LgrpDiv, int size);
741    /**    /**
742     * \brief This will return the power term of the length - weight relationship     * \brief This will return the power term of the length - weight relationship
743     * \return growthPar[4]     * \return growthPar[4]
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