#include "multinomial.h" #include "mathfunc.h" #include "errorhandler.h" #include "gadget.h" #include "global.h" double Multinomial::calcLogLikelihood(const DoubleVector& data, const DoubleVector& dist) { int i; double minp = 1.0 / (dist.Size() * bigvalue); double sumdist, sumdata, sumlog, likely, tmp; if (data.Size() != dist.Size()) handle.logMessage(LOGFAIL, "Error in multinomial - vectors not the same size"); sumdist = sumdata = sumlog = likely = 0.0; for (i = 0; i < data.Size(); i++) { sumdist += dist[i]; sumdata += data[i]; sumlog += logFactorial(data[i]); } if (isZero(sumdist)) return 0.0; tmp = 1.0 / sumdist; for (i = 0; i < data.Size(); i++) { if (isZero(data[i])) likely += 0.0; else if (((dist[i] * tmp) > minp) || (isEqual((dist[i] * tmp), minp))) likely -= data[i] * log(dist[i] * tmp); else likely -= data[i] * log(minp); } sumlog -= logFactorial(sumdata); tmp = 2.0 * (likely + sumlog); if (tmp < 0.0) handle.logMessage(LOGWARN, "Warning in multinomial - negative total", tmp); loglikelihood += tmp; return tmp; }